Publications of Carsten Maus

2011

• Bittig AT, Haack F, Maus C & Uhrmacher AM (2011): Adapting Rule-based Model Descriptions for Simulating in Continuous and Hybrid Space. Proceedings of the 9th International Conference on Computational Methods in Systems Biology, pp. 161-170, ACM, New York, NY, USA. CMSB '11.
• Maus C, Rybacki S & Uhrmacher AM (2011): Formal Rule-based Multi-Level Modeling. - Poster, Heidelberg/Mannheim, Germany, 12th International Conference on Systems Biology (ICSB).
• Maus C, Rybacki S & Uhrmacher AM (2011): Rule-based multi-level modeling of cell biological systems. BMC Systems Biology, 5(166).

2010

• Maus C, John M, Rybacki S & Uhrmacher AM (2010): Towards Rule-Based Multi-Level Modeling. - Poster, Edinburgh, UK, 11th International Conference on Systems Biology (ICSB).

2009

• Mazemondet O, John M, Maus C, Uhrmacher AM & Rolfs A (2009): Integrating Diverse Reaction Types Into Stochastic Models - A Signaling Pathway Case Study in the Imperative Pi-Calculus. In: M. D. Rossetti, R. R. Hill, B. Johansson, A. Dunkin, R. G. Ingalls (ed.): Proceedings of the Winter Simulation Conference, Austin, TX, USA, pp. 932-943, IEEE Computer Society.
• Mazemondet O, John M, Maus C, Uhrmacher AM & Rolfs A (2009): Modeling the Cell Cycle Dependency of the Wnt/β-catenin Signaling Pathway in the Imperative π-Calculus. - Poster, Bologna, Italy, Computational Methods in Systems Biology (CMSB).
• Henkel R, Köhn D, Peters A & Maus C (2009): Similarity Measures for Computational Biological Models. - Poster, Manchester, UK, Data Integration in the Life Sciences, 6th International Workshop, DILS 2009.
• Maus C, Jeschke M & Uhrmacher AM (2009): Spatial Multi-Level Modelling and Simulation for Systems Biology. - Poster, Bologna, Italy, Computational Methods in Systems Biology (CMSB).
• Köhn D, Maus C, Henkel R & Kolbe M (2009): Towards Enhanced Retrieval of Biological Models Through Annotation-based Ranking. In: Norman W. Paton, Paolo Missier, Cornelia Hedeler (ed.): Data Integration in the Life Sciences, 6th International Workshop, DILS 2009, Manchester, UK, 20th-22nd July, Vol. 5647, pp. 204-219, Springer. Lecture Notes in Bioinformatics.

2008

• Maus C (2008): Component-based Modelling of RNA Structure Folding. Computational Methods in Systems Biology, International Conference, CMSB 2008, Rostock, Germany, October 12-15, 2008, Proceedings, Vol. 5307, pp. 44-62, Springer, Berlin / Heidelberg. Lecture Notes in Computer Science.
• Köhn D, Heuer A & Maus C (2008): Eine Datenbanklösung für Modellwiederverwendung in der Systembiologie. Tagungsband zum 20. GI-Workshop über Grundlagen von Datenbanken, Apolda, Thüringen, School of Information Technology, International University in Germany.
• Maus C, John M, Röhl M & Uhrmacher A (2008): Hierarchical Modeling for Computational Biology. In: Marco Bernardo, Pierpaolo Degano and Gianluigi Zavattaro (ed.): SFM 2008, Formal Methods for Computational Systems Biology, pp. 81-124, Springer, Berlin Heidelberg. Lecture Notes in Computer Science.
• Uhrmacher AM, Himmelspach J, Jeschke M, John M, Leye S, Maus C, Röhl M & Ewald R (2008): One Modeling Formalism & Simulator is not enough! - A Perspective for Computational Biology Based on JAMES II. In: Jasmin Fisher (ed.): Proceedings of the 1st FMSB Workshop, pp. 123-138, Springer, Cambridge, UK. Lecture Notes of Computer Science, LNBI subseries.

2007

• Maus C, John M & Uhrmacher AM (2007): A Multi-Level and Multi-Formalism Approach for Model Composition in Systems Biology. - Poster, Edinburgh (GB), Computational Methods in Systems Biology (CMSB).
• Uhrmacher A, Ewald R, John M, Maus C, Jeschke M & Biermann S (2007): Combining Micro and Macro-Modeling in DEVS for Computational Biology. WSC '07: Proceedings of the 39th conference on Winter simulation, pp. 871-880, IEEE Press.
• Ewald R, Maus C, Rolfs A & Uhrmacher A (2007): Discrete Event Modelling and Simulation in Systems Biology. Journal of Simulation, 1(2):81-96.

2006

• Ewald R, Gutzeit E, Schwanke S, Uhrmacher A, Lange C, Biermann S & Maus C (2006): Multi-Level Modeling with DEVS - A Critical Inspection and Steps Towards a Feasible Approach . - Poster, Monterey, Winter Simulation Conference.
• Maus C (2006): Simulation of the kinetically controlled riboswitch folding in 5' untranslated mRNA regions. - Poster, Monterey, Winter Simulation Conference.